BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F04LP1|AL430083
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1794 0.0
>3x_Contig1766
Length = 23951
Score = 1794 bits (901), Expect = 0.0
Identities = 910/917 (99%)
Strand = Plus / Minus
Query: 1 gatccagaagaatccatctttatcacgggcaacaccatcaccagtgaagtaatagcccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 gatccagaagaatccatctttatcacgggcaacaccatcaccagtgaagtaatagcccgg 2702
Query: 61 gtatggtttcaagtacgtgtctaagaacctatcgttattcttccaaatggttcttgcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 gtatggtttcaagtacgtgtctaagaacctatcgttattcttccaaatggttcttgcgaa 2642
Query: 121 agatggccaaggtcttttaatggcaagaacaccttctgcatgttcaccagtttgctcgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 agatggccaaggtcttttaatggcaagaacaccttctgcatgttcaccagtttgctcgat 2582
Query: 181 acctgtggktggatccaacactgccaaatcaataccaaagaatgggaatgccgctgcacc 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 acctgtggttggatccaacactgccaaatcaataccaaagaatgggaatgccgctgcacc 2522
Query: 241 tggtttcattggagtagcaccaccagccaatggagtgaccaagtgggagccagaatcagt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2521 tggtttcattggagtagcaccaccagccaatggagtgaccaagtgggagccagattcagt 2462
Query: 301 ttgccagtatgtgtctacgattggtagctcattcttaccaatcttttcagagtaccattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ttgccagtatgtgtctacgattggtagctcattcttaccaatcttttcagagtaccattc 2402
Query: 361 ccaaacttcagcagcgataggttcaccaacggaacccaaggagcgcaatgacttgagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 ccaaacttcagcagcgataggttcaccaacggaacccaaggagcgcaatgacttgagaga 2342
Query: 421 gaatccttcagtaaaggaatcaccagctctcttcaatagacgtagtgcagttggggctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 gaatccttcagtaaaggaatcaccagctctcttcaatagacgtagtgcagttggggctac 2282
Query: 481 atagaattgagtcacttggtacttgtcaacaatttcccaataacgagaaaagtttggata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 atagaattgagtcacttggtacttgtcaacaatttcccaataacgagaaaagtttggata 2222
Query: 541 ggcaggtgtaccttcgaacaccaaagtagtacaaccttgtaacaatggaccgtaaacaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 ggcaggtgtaccttcgaacaccaaagtagtacaaccttgtaacaatggaccgtaaacaca 2162
Query: 601 gtatgtgtgaccagtgatccaaccaatgtcacctgcggkgaagaagatgtcatcgttttg 660
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2161 gtatgtgtgaccagtgatccaaccaatgtcacctgcggtgaagaagatgtcatcgttttg 2102
Query: 661 gatgtcaaaggtgtatttcatacttaataatgcttggagcaagtwacctgctgtagaatg 720
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2101 gatgtcaaaggtgtatttcatacttaataatgcttggagcaagtaacctgctgtagaatg 2042
Query: 721 ttgaacaccctttggagcaccggtggaacccgaagtatacaataagaacaaaggatgttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 ttgaacaccctttggagcaccggtggaacccgaagtatacaataagaacaaaggatgttc 1982
Query: 781 agagtcaacaggttcgcatggggtgtaagawttgtacttcttgacttcctcatcccagtm 840
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1981 agagtcaacaggttcgcatggggtgtaagatttgtacttcttgacttcctcatcccagtc 1922
Query: 841 caaatccctacctggaatgtacttgatattttcgttatgagtacgtttgaagacmaaaac 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1921 caaatccctacctggaatgtacttgatattttcgttatgagtacgtttgaagaccaaaac 1862
Query: 901 gtttgttacttgagggg 917
|||||||||||||||||
Sbjct: 1861 gtttgttacttgagggg 1845
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5742
Number of Sequences: 1807
Number of extensions: 5742
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)